Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_1222 | Not Available | Positive | 6533363 - 6534274 | 31046.1 |
| beta-lactamase class c | SAMN05444680_1223 | Not Available | Negative | 6534531 - 6535562 | 37688.1 |
| dna-binding beta-propeller fold protein ynce | SAMN05444680_1224 | Not Available | Negative | 6536350 - 6537453 | 36609.7 |
| phage integrase family protein | SAMN05444680_1225 | Not Available | Positive | 6537855 - 6538475 | 23583.6 |
| glycine zipper 2tm domain-containing protein | SAMN05444680_1226 | Not Available | Positive | 6538793 - 6539311 | 16906.1 |
| cu+-exporting atpase | SAMN05444680_1227 | Not Available | Positive | 6539965 - 6540231 | 9180.44 |
| undecaprenyl-diphosphatase | SAMN05444680_1228 | Not Available | Positive | 6540232 - 6540927 | 24302.9 |
| putative mn2+ efflux pump mntp | SAMN05444680_1229 | Not Available | Negative | 6541855 - 6542394 | 18830.3 |
| hypothetical protein | SAMN05444680_12210 | Not Available | Negative | 6542601 - 6542768 | 6204.65 |
| high-affinity iron transporter | SAMN05444680_12211 | Not Available | Positive | 6543586 - 6544926 | 47735.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
