Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein/pimeloyl-coa dehydrogenase | SAMN05444680_12163 | Not Available | Positive | 6512414 - 6513550 | 39756.8 |
| long-chain acyl-coa synthetase | SAMN05444680_12164 | Not Available | Positive | 6513576 - 6515126 | 56084.6 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444680_12165 | Not Available | Positive | 6515138 - 6516217 | 40049.9 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | SAMN05444680_12166 | Not Available | Positive | 6516214 - 6517098 | 32132.4 |
| transcriptional regulator, iclr family | SAMN05444680_12167 | Not Available | Negative | 6517055 - 6517792 | 26379.5 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN05444680_12168 | Not Available | Negative | 6517857 - 6518855 | 36191.4 |
| l-erythro-3-methylmalyl-coa dehydratase | SAMN05444680_12169 | Not Available | Negative | 6518852 - 6519934 | 39197.6 |
| butyryl-coa dehydrogenase/acyl-coa dehydrogenase | SAMN05444680_12170 | Not Available | Negative | 6519931 - 6521097 | 42667.1 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444680_12171 | Not Available | Negative | 6521134 - 6522363 | 44248.2 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_12172 | Not Available | Negative | 6522365 - 6523375 | 35771.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
