Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid phosphatase (class a) | SAMN05444680_12153 | Not Available | Positive | 6498609 - 6499346 | 25875.4 |
| uncharacterized conserved protein | SAMN05444680_12154 | Not Available | Positive | 6499431 - 6500750 | 48898.3 |
| butyryl-coa dehydrogenase | SAMN05444680_12155 | Not Available | Positive | 6500862 - 6502007 | 40508.5 |
| luxr family transcriptional regulator, maltose regulon positive regulatory protein | SAMN05444680_12156 | Not Available | Positive | 6502151 - 6504808 | 98781.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_12157 | Not Available | Positive | 6504905 - 6505861 | 33671.5 |
| fatty-acyl-coa synthase | SAMN05444680_12158 | Not Available | Positive | 6505858 - 6507561 | 62305.0 |
| 3-hydroxy-3-methylglutaryl coa synthase | SAMN05444680_12159 | Not Available | Positive | 6507604 - 6509061 | 51711.7 |
| acetyl-coa c-acetyltransferase | SAMN05444680_12160 | Not Available | Positive | 6509077 - 6510276 | 42106.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_12161 | Not Available | Positive | 6510313 - 6511224 | 32384.0 |
| pimeloyl-coa dehydrogenase | SAMN05444680_12162 | Not Available | Positive | 6511236 - 6512408 | 43717.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
