Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | SAMN05444680_1213 | Not Available | Negative | 6428361 - 6430184 | 66471.4 |
| enoyl-coa hydratase | SAMN05444680_1214 | Not Available | Positive | 6430376 - 6431215 | 29809.8 |
| acetyl-coa acetyltransferase | SAMN05444680_1215 | Not Available | Positive | 6431244 - 6432422 | 41282.5 |
| acetyl-coa hydrolase | SAMN05444680_1216 | Not Available | Positive | 6432430 - 6433539 | 39179.1 |
| protein of unknown function | SAMN05444680_1217 | Not Available | Positive | 6433580 - 6434620 | 38487.5 |
| uncharacterized conserved protein | SAMN05444680_1218 | Not Available | Positive | 6434649 - 6436079 | 52894.0 |
| hypothetical protein | SAMN05444680_1219 | Not Available | Negative | 6436148 - 6437329 | 43200.8 |
| acyltransferase, ws/dgat/mgat | SAMN05444680_12110 | Not Available | Positive | 6437538 - 6439163 | 57904.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_12111 | Not Available | Positive | 6439178 - 6439897 | 25403.9 |
| acid phosphatase (class a) | SAMN05444680_12112 | Not Available | Positive | 6440005 - 6440853 | 29302.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
