Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| butyryl-coa dehydrogenase/hypothetical protein | SAMN05444680_12094 | Not Available | Positive | 6417795 - 6419042 | 44474.5 |
| hypothetical protein | SAMN05444680_12095 | Not Available | Negative | 6419532 - 6419921 | 13272.0 |
| hypothetical protein | SAMN05444680_12096 | Not Available | Negative | 6420491 - 6420661 | 6145.66 |
| hypothetical protein | SAMN05444680_12097 | Not Available | Negative | 6420825 - 6421115 | 10097.1 |
| adenylate cyclase | SAMN05444680_12098 | Not Available | Negative | 6421578 - 6423347 | 64426.6 |
| transcriptional regulator, tetr family | SAMN05444680_12099 | Not Available | Positive | 6423602 - 6424180 | 21688.1 |
| udp:flavonoid glycosyltransferase yjic, ydhe family | SAMN05444680_120100 | Not Available | Positive | 6424191 - 6425330 | 40197.4 |
| transposase | SAMN05444680_120101 | Not Available | Negative | 6425901 - 6427037 | 41269.0 |
| electron transfer flavoprotein beta subunit | SAMN05444680_1211 | Not Available | Negative | 6427258 - 6428000 | 26525.5 |
| hypothetical protein | SAMN05444680_1212 | Not Available | Positive | 6428236 - 6428460 | 7724.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
