Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_12084 | Not Available | Positive | 6407873 - 6408088 | 8101.69 |
| uncharacterized alpha/beta hydrolase domain | SAMN05444680_12085 | Not Available | Positive | 6408219 - 6410258 | 74058.8 |
| hypothetical protein | SAMN05444680_12086 | Not Available | Negative | 6410373 - 6410915 | 19527.8 |
| hypothetical protein | SAMN05444680_12087 | Not Available | Positive | 6411333 - 6411554 | 8165.61 |
| transcriptional regulator, iclr family | SAMN05444680_12088 | Not Available | Negative | 6412371 - 6413114 | 26523.8 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_12089 | Not Available | Positive | 6413215 - 6414192 | 34211.6 |
| regulator of rnase e activity rraa | SAMN05444680_12090 | Not Available | Positive | 6414227 - 6414904 | 23752.7 |
| 4-oxalomesaconate hydratase | SAMN05444680_12091 | Not Available | Positive | 6414944 - 6415975 | 38831.3 |
| hypothetical protein | SAMN05444680_12092 | Not Available | Positive | 6415986 - 6416627 | 23047.8 |
| arac-type dna-binding protein | SAMN05444680_12093 | Not Available | Negative | 6416714 - 6417625 | 33378.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
