Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain acyl-coa synthetase | SAMN05444680_12074 | Not Available | Negative | 6399475 - 6400989 | 53848.1 |
| biotin transport system substrate-specific component | SAMN05444680_12075 | Not Available | Negative | 6401012 - 6401587 | 19387.7 |
| hypothetical protein | SAMN05444680_12076 | Not Available | Positive | 6401853 - 6402008 | 5784.23 |
| hypothetical protein | SAMN05444680_12077 | Not Available | Negative | 6401978 - 6402163 | 6833.31 |
| hypothetical protein | SAMN05444680_12078 | Not Available | Negative | 6402901 - 6403740 | 30038.6 |
| pare toxin of type ii toxin-antitoxin system, parde | SAMN05444680_12079 | Not Available | Positive | 6403759 - 6403962 | 7765.59 |
| dna-binding protein h-ns | SAMN05444680_12080 | Not Available | Negative | 6404043 - 6404549 | 18444.9 |
| hypothetical protein | SAMN05444680_12081 | Not Available | Positive | 6404915 - 6405454 | 20051.3 |
| site-specific recombinase xerd | SAMN05444680_12082 | Not Available | Positive | 6405686 - 6406723 | 38079.2 |
| hypothetical protein | SAMN05444680_12083 | Not Available | Positive | 6406818 - 6407039 | 8082.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
