Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent lon protease | SAMN05444680_12034 | Not Available | Positive | 6353062 - 6353256 | 6847.49 |
| ca2+-transporting atpase | SAMN05444680_12035 | Not Available | Negative | 6353376 - 6353705 | 11503.8 |
| hypothetical protein | SAMN05444680_12036 | Not Available | Negative | 6353674 - 6353952 | 10234.5 |
| membrane protease ftsh catalytic subunit | SAMN05444680_12037 | Not Available | Negative | 6354130 - 6355983 | 66950.0 |
| hypothetical protein | SAMN05444680_12038 | Not Available | Negative | 6355991 - 6356320 | 11860.1 |
| polyhydroxyalkanoate synthase | SAMN05444680_12039 | Not Available | Negative | 6356430 - 6357620 | 43508.6 |
| osmotically-inducible protein osmy, contains bon domain | SAMN05444680_12040 | Not Available | Positive | 6358078 - 6358728 | 23348.8 |
| transposase domain | SAMN05444680_12041 | Not Available | Positive | 6359180 - 6359551 | 13911.7 |
| plasma-membrane calcium-translocating p-type atpase | SAMN05444680_12042 | Not Available | Negative | 6359775 - 6362471 | 97372.3 |
| kup system potassium uptake protein | SAMN05444680_12043 | Not Available | Negative | 6362875 - 6363501 | 22419.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
