Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hsp70 protein | SAMN05444680_12024 | Not Available | Positive | 6341125 - 6343899 | 99266.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_12025 | Not Available | Positive | 6344137 - 6345084 | 33545.3 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN05444680_12026 | Not Available | Positive | 6345652 - 6345936 | 10008.2 |
| osmotically-inducible protein osmy, contains bon domain | SAMN05444680_12027 | Not Available | Positive | 6346069 - 6346593 | 19111.1 |
| long-chain acyl-coa synthetase | SAMN05444680_12028 | Not Available | Positive | 6346671 - 6348221 | 56058.0 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferases | SAMN05444680_12029 | Not Available | Negative | 6348408 - 6351242 | 101507.0 |
| hypothetical protein | SAMN05444680_12030 | Not Available | Negative | 6351306 - 6351953 | 24569.4 |
| protein of unknown function | SAMN05444680_12031 | Not Available | Positive | 6352279 - 6352518 | 8662.43 |
| protein required for attachment to host cells | SAMN05444680_12032 | Not Available | Positive | 6352562 - 6352774 | 7816.18 |
| protein required for attachment to host cells | SAMN05444680_12033 | Not Available | Positive | 6352811 - 6353029 | 7550.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
