Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase and inactivated derivatives, tnpa family | SAMN05444680_12014 | Not Available | Positive | 6329729 - 6331303 | 58079.3 |
| dde superfamily endonuclease | SAMN05444680_12015 | Not Available | Positive | 6331751 - 6332062 | 12270.6 |
| tir domain-containing protein | SAMN05444680_12016 | Not Available | Negative | 6332350 - 6334299 | 72335.1 |
| homeodomain-like domain-containing protein | SAMN05444680_12017 | Not Available | Negative | 6335422 - 6335784 | 13665.3 |
| transcriptional regulator, abiei antitoxin, type iv ta system | SAMN05444680_12018 | Not Available | Positive | 6336261 - 6336878 | 22551.6 |
| nucleotidyl transferase abieii toxin, type iv ta system | SAMN05444680_12019 | Not Available | Positive | 6336875 - 6337717 | 31057.3 |
| hypothetical protein | SAMN05444680_12020 | Not Available | Negative | 6337536 - 6338135 | 21678.9 |
| hypothetical protein | SAMN05444680_12021 | Not Available | Positive | 6338474 - 6338569 | 3350.78 |
| protein of unknown function | SAMN05444680_12022 | Not Available | Positive | 6338650 - 6339240 | 20686.7 |
| molecular chaperone dnak (hsp70) | SAMN05444680_12023 | Not Available | Positive | 6339237 - 6341105 | 65752.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
