Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_119113 | Not Available | Negative | 6299745 - 6300209 | 17473.7 |
| feruloyl-coa synthase | SAMN05444680_119114 | Not Available | Negative | 6300279 - 6302090 | 66211.5 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN05444680_119115 | Not Available | Negative | 6302127 - 6303077 | 33810.6 |
| uncharacterized conserved protein, duf849 family | SAMN05444680_119116 | Not Available | Negative | 6303094 - 6304014 | 33758.9 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444680_119117 | Not Available | Positive | 6304120 - 6304842 | 26763.2 |
| sseb protein n-terminal domain-containing protein | SAMN05444680_119118 | Not Available | Negative | 6304845 - 6305213 | 13240.3 |
| hypothetical protein | SAMN05444680_119119 | Not Available | Negative | 6305242 - 6305865 | 20764.0 |
| transposase, is5 family | SAMN05444680_1201 | Not Available | Negative | 6305866 - 6306362 | 18820.7 |
| protein of unknown function | SAMN05444680_1202 | Not Available | Negative | 6306668 - 6308179 | 53014.4 |
| hypothetical protein | SAMN05444680_1203 | Not Available | Positive | 6309344 - 6310132 | 29720.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
