Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05444680_11973 | Not Available | Positive | 6258860 - 6260104 | 42710.7 |
| glutathione s-transferase | SAMN05444680_11974 | Not Available | Negative | 6260109 - 6260717 | 22624.1 |
| protein of unknown function | SAMN05444680_11975 | Not Available | Positive | 6260897 - 6261082 | 6004.86 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | SAMN05444680_11976 | Not Available | Positive | 6261257 - 6263203 | 71668.5 |
| 16s rrna m(7)g-527 methyltransferase | SAMN05444680_11977 | Not Available | Positive | 6263200 - 6263838 | 22722.7 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05444680_11978 | Not Available | Positive | 6263899 - 6264513 | 22055.7 |
| chromosome partitioning protein | SAMN05444680_11979 | Not Available | Positive | 6264523 - 6265392 | 30996.6 |
| hypothetical protein | SAMN05444680_11980 | Not Available | Positive | 6265425 - 6265967 | 20144.9 |
| chromosome partitioning protein, parb family | SAMN05444680_11981 | Not Available | Positive | 6265973 - 6266914 | 33771.7 |
| d-lactate dehydrogenase (cytochrome) | SAMN05444680_11982 | Not Available | Negative | 6267023 - 6268447 | 50652.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
