Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ltxxq motif family protein | SAMN05444680_11953 | Not Available | Negative | 6236688 - 6237230 | 19588.2 |
| hypothetical protein | SAMN05444680_11954 | Not Available | Negative | 6237364 - 6238260 | 32963.3 |
| asp/glu/hydantoin racemase | SAMN05444680_11955 | Not Available | Negative | 6238316 - 6239050 | 24454.9 |
| putative spermidine/putrescine transport system permease protein | SAMN05444680_11956 | Not Available | Negative | 6239064 - 6239954 | 31718.4 |
| putative spermidine/putrescine transport system permease protein | SAMN05444680_11957 | Not Available | Negative | 6239957 - 6240877 | 33886.4 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05444680_11958 | Not Available | Negative | 6240893 - 6242164 | 46432.9 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN05444680_11959 | Not Available | Negative | 6242240 - 6243352 | 39638.8 |
| transglycosylase | SAMN05444680_11960 | Not Available | Negative | 6243424 - 6244698 | 45429.7 |
| hypothetical protein | SAMN05444680_11961 | Not Available | Negative | 6244706 - 6245359 | 24121.8 |
| exosortase/archaeosortase family protein | SAMN05444680_11962 | Not Available | Negative | 6245340 - 6246218 | 30673.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
