Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit b | SAMN05444680_11943 | Not Available | Positive | 6226618 - 6229239 | 95664.1 |
| hypothetical protein | SAMN05444680_11944 | Not Available | Positive | 6229382 - 6229882 | 18084.6 |
| hypothetical protein | SAMN05444680_11945 | Not Available | Positive | 6230060 - 6231244 | 42847.2 |
| hypothetical protein | SAMN05444680_11946 | Not Available | Negative | 6231540 - 6232028 | 17050.3 |
| lipid a 3-o-deacylase | SAMN05444680_11947 | Not Available | Positive | 6232211 - 6232783 | 20846.5 |
| dna polymerase | SAMN05444680_11948 | Not Available | Negative | 6232725 - 6233468 | 28047.5 |
| hypothetical protein | SAMN05444680_11949 | Not Available | Negative | 6233558 - 6234553 | 36114.8 |
| cardiolipin synthase | SAMN05444680_11950 | Not Available | Negative | 6234553 - 6235791 | 46533.1 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444680_11951 | Not Available | Negative | 6235788 - 6236573 | 29285.4 |
| hypothetical protein | SAMN05444680_11952 | Not Available | Negative | 6236570 - 6236734 | 6167.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
