Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kef-type potassium/proton antiporter, cpa2 family | SAMN05444680_11933 | Not Available | Positive | 6215891 - 6217876 | 71261.9 |
| hypothetical protein | SAMN05444680_11934 | Not Available | Negative | 6217898 - 6218734 | 28921.5 |
| cyclic nucleotide-binding domain-containing protein | SAMN05444680_11935 | Not Available | Negative | 6218741 - 6219208 | 16725.2 |
| trna modification gtpase trme | SAMN05444680_11936 | Not Available | Negative | 6219295 - 6220701 | 49248.0 |
| protein translocase subunit yidc | SAMN05444680_11937 | Not Available | Negative | 6220777 - 6222534 | 65188.4 |
| hypothetical protein | SAMN05444680_11938 | Not Available | Negative | 6222531 - 6222818 | 10500.8 |
| ribonuclease p protein component | SAMN05444680_11939 | Not Available | Negative | 6222815 - 6223201 | 13886.9 |
| lsu ribosomal protein l34p | SAMN05444680_11940 | Not Available | Negative | 6223275 - 6223409 | 5128.46 |
| chromosomal replication initiator protein | SAMN05444680_11941 | Not Available | Positive | 6223726 - 6225105 | 51640.1 |
| dna polymerase iii, beta subunit | SAMN05444680_11942 | Not Available | Positive | 6225374 - 6226480 | 40473.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
