Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_101543 | Not Available | Negative | 562941 - 563930 | 34448.4 |
| malonyl-coa decarboxylase | SAMN05444680_101544 | Not Available | Negative | 564001 - 565428 | 52803.2 |
| outer membrane protein ompa | SAMN05444680_101545 | Not Available | Negative | 565621 - 566829 | 43142.7 |
| serine/threonine protein kinase | SAMN05444680_101546 | Not Available | Negative | 566826 - 568817 | 70870.4 |
| phosphatidylglycerol:prolipoprotein diacylglycerol transferase | SAMN05444680_101547 | Not Available | Negative | 568936 - 569763 | 31380.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_101548 | Not Available | Negative | 569792 - 570730 | 34123.7 |
| dihydroxyacid dehydratase | SAMN05444680_101549 | Not Available | Positive | 570841 - 572535 | 59287.7 |
| small trp-rich protein | SAMN05444680_101550 | Not Available | Negative | 572651 - 572887 | 9111.21 |
| cytochrome c | SAMN05444680_101551 | Not Available | Positive | 572995 - 573300 | 10388.8 |
| hypothetical protein | SAMN05444680_101552 | Not Available | Negative | 573310 - 573816 | 18420.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
