Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic chaperone for outer membrane proteins sura | SAMN05444680_11913 | Not Available | Negative | 6195908 - 6197293 | 50806.5 |
| lps-assembly protein | SAMN05444680_11914 | Not Available | Negative | 6197312 - 6199726 | 89810.2 |
| hypothetical protein | SAMN05444680_11915 | Not Available | Positive | 6199825 - 6200919 | 40975.1 |
| 16s rrna (uracil1498-n3)-methyltransferase | SAMN05444680_11916 | Not Available | Positive | 6200916 - 6201629 | 25538.6 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN05444680_11917 | Not Available | Positive | 6201701 - 6203017 | 45867.0 |
| uncharacterized conserved protein yidb, duf937 family | SAMN05444680_11918 | Not Available | Positive | 6203056 - 6203523 | 15072.1 |
| predicted arabinose efflux permease, mfs family | SAMN05444680_11919 | Not Available | Positive | 6203607 - 6204776 | 41405.6 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN05444680_11920 | Not Available | Negative | 6204773 - 6205618 | 30226.0 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN05444680_11921 | Not Available | Negative | 6205615 - 6207111 | 53695.2 |
| uncharacterized conserved protein yece, duf72 family | SAMN05444680_11922 | Not Available | Positive | 6207234 - 6208055 | 30399.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
