Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN05444680_118120 | Not Available | Negative | 6173579 - 6174760 | 44354.6 |
| fmn reductase | SAMN05444680_118121 | Not Available | Negative | 6174827 - 6175372 | 19656.5 |
| transcriptional regulator, lysr family | SAMN05444680_118122 | Not Available | Positive | 6175701 - 6176603 | 32549.7 |
| aldehyde dehydrogenase (nad+) | SAMN05444680_118123 | Not Available | Positive | 6176755 - 6178242 | 52595.1 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444680_118124 | Not Available | Positive | 6178283 - 6179428 | 41330.8 |
| hypothetical protein | SAMN05444680_118125 | Not Available | Negative | 6180143 - 6181309 | 41162.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_118126 | Not Available | Positive | 6181571 - 6182542 | 34401.8 |
| 3-keto-5-aminohexanoate cleavage enzyme | SAMN05444680_118127 | Not Available | Positive | 6182577 - 6182980 | 14899.7 |
| hypothetical protein | SAMN05444680_1191 | Not Available | Negative | 6182981 - 6183551 | 18652.5 |
| xaa-pro aminopeptidase | SAMN05444680_1192 | Not Available | Positive | 6183689 - 6185074 | 51291.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
