Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein | SAMN05444680_11870 | Not Available | Positive | 6127392 - 6128480 | 39612.2 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05444680_11871 | Not Available | Positive | 6128477 - 6129352 | 30002.0 |
| peptide/nickel transport system atp-binding protein | SAMN05444680_11872 | Not Available | Negative | 6129370 - 6131082 | 62396.8 |
| peptide/nickel transport system permease protein | SAMN05444680_11873 | Not Available | Negative | 6131082 - 6132068 | 34193.3 |
| peptide/nickel transport system permease protein | SAMN05444680_11874 | Not Available | Negative | 6132107 - 6133090 | 35126.9 |
| lysr family transcriptional regulator, cys regulon transcriptional activator | SAMN05444680_11875 | Not Available | Positive | 6133231 - 6134148 | 33445.3 |
| fmn reductase | SAMN05444680_11876 | Not Available | Negative | 6134179 - 6134772 | 21316.9 |
| fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase family | SAMN05444680_11877 | Not Available | Positive | 6134991 - 6136358 | 49843.0 |
| acyl-coa dehydrogenase, c-terminal domain | SAMN05444680_11878 | Not Available | Positive | 6136644 - 6137405 | 26945.5 |
| hypothetical protein | SAMN05444680_11879 | Not Available | Negative | 6137412 - 6138236 | 29198.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
