Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex transport system substrate-binding protein | SAMN05444680_101531 | Not Available | Negative | 554227 - 555093 | 30895.4 |
| adenosylcobinamide kinase /adenosylcobinamide-phosphate guanylyltransferase | SAMN05444680_101532 | Not Available | Negative | 555090 - 555659 | 20109.6 |
| vitamin b12 transporter | SAMN05444680_101533 | Not Available | Negative | 555656 - 557533 | 67936.7 |
| hypothetical protein | SAMN05444680_101535 | Not Available | Positive | 557937 - 558164 | 8542.15 |
| cell division protein zapa | SAMN05444680_101536 | Not Available | Positive | 558161 - 558487 | 11380.6 |
| uncharacterized membrane protein yfca | SAMN05444680_101538 | Not Available | Positive | 558769 - 559584 | 27821.2 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444680_101539 | Not Available | Positive | 559657 - 560100 | 15484.7 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444680_101540 | Not Available | Positive | 560170 - 560595 | 15187.5 |
| malonyl-coa/methylmalonyl-coa synthetase | SAMN05444680_101541 | Not Available | Negative | 560602 - 562161 | 56888.3 |
| enoyl-coa hydratase/carnithine racemase | SAMN05444680_101542 | Not Available | Negative | 562168 - 562944 | 27132.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
