Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_11850 | Not Available | Positive | 6105707 - 6105985 | 10221.0 |
| two component transcriptional regulator, luxr family | SAMN05444680_11851 | Not Available | Positive | 6105982 - 6106593 | 22402.1 |
| phage integrase family protein | SAMN05444680_11852 | Not Available | Positive | 6106801 - 6107421 | 23270.1 |
| hypothetical protein | SAMN05444680_11853 | Not Available | Negative | 6107531 - 6108184 | 23957.7 |
| hypothetical protein | SAMN05444680_11854 | Not Available | Positive | 6108809 - 6109360 | 20899.8 |
| hypothetical protein/3-hydroxypropanoate dehydrogenase | SAMN05444680_11855 | Not Available | Negative | 6109549 - 6110145 | 21474.4 |
| hypothetical protein | SAMN05444680_11856 | Not Available | Negative | 6110186 - 6110410 | 7998.87 |
| cysteine desulfurase | SAMN05444680_11857 | Not Available | Negative | 6110519 - 6112306 | 63230.4 |
| hypothetical protein | SAMN05444680_11858 | Not Available | Negative | 6112322 - 6113260 | 34707.4 |
| serine o-acetyltransferase | SAMN05444680_11859 | Not Available | Negative | 6113326 - 6114231 | 32614.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
