Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05444680_11830 | Not Available | Negative | 6086557 - 6087456 | 32952.3 |
| outer membrane protein (porin) | SAMN05444680_11831 | Not Available | Negative | 6087583 - 6088656 | 37665.8 |
| aminocarboxymuconate-semialdehyde decarboxylase | SAMN05444680_11832 | Not Available | Negative | 6088707 - 6089699 | 36599.0 |
| 3-hydroxyanthranilate 3,4-dioxygenase | SAMN05444680_11833 | Not Available | Negative | 6089696 - 6090265 | 22016.9 |
| 2-aminomuconate deaminase | SAMN05444680_11834 | Not Available | Negative | 6090286 - 6090726 | 16185.1 |
| 2-oxo-3-hexenedioate decarboxylase | SAMN05444680_11835 | Not Available | Negative | 6090723 - 6091514 | 27735.3 |
| 4-hydroxy 2-oxovalerate aldolase | SAMN05444680_11836 | Not Available | Negative | 6091511 - 6092539 | 36615.9 |
| acetaldehyde dehydrogenase | SAMN05444680_11837 | Not Available | Negative | 6092536 - 6093489 | 33471.2 |
| 2-keto-4-pentenoate hydratase | SAMN05444680_11838 | Not Available | Negative | 6093486 - 6094307 | 28678.5 |
| aminomuconate-semialdehyde/2-hydroxymuconate-6- semialdehyde dehydrogenase | SAMN05444680_11839 | Not Available | Negative | 6094341 - 6095825 | 53455.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
