Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitt/taut family transport system permease protein | SAMN05444680_11820 | Not Available | Positive | 6078843 - 6079697 | 30990.8 |
| polar amino acid transport system substrate-binding protein | SAMN05444680_11821 | Not Available | Positive | 6079690 - 6080595 | 31386.2 |
| sulfatase | SAMN05444680_11822 | Not Available | Negative | 6080547 - 6080783 | 8026.44 |
| sulfonate transport system substrate-binding protein | SAMN05444680_11823 | Not Available | Negative | 6080791 - 6081231 | 16271.3 |
| hypothetical protein | SAMN05444680_11824 | Not Available | Positive | 6081835 - 6082071 | 8650.05 |
| hypothetical protein | SAMN05444680_11825 | Not Available | Positive | 6082280 - 6083311 | 37445.5 |
| hypothetical protein | SAMN05444680_11826 | Not Available | Negative | 6083377 - 6083796 | 15882.8 |
| nramp (natural resistance-associated macrophage protein) metal ion transporters | SAMN05444680_11827 | Not Available | Negative | 6083901 - 6085202 | 46133.2 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444680_11828 | Not Available | Negative | 6085215 - 6086039 | 30050.1 |
| hypothetical protein | SAMN05444680_11829 | Not Available | Positive | 6086344 - 6086616 | 10094.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
