Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone biosynthesis protein e | SAMN05444680_11810 | Not Available | Positive | 6065565 - 6066758 | 43618.2 |
| outer membrane receptor proteins, mostly fe transport | SAMN05444680_11811 | Not Available | Negative | 6066874 - 6069408 | 89737.7 |
| high potential iron-sulfur protein | SAMN05444680_11812 | Not Available | Negative | 6069442 - 6069792 | 12244.7 |
| alcohol dehydrogenase (cytochrome c) | SAMN05444680_11813 | Not Available | Negative | 6069804 - 6071576 | 63162.0 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN05444680_11814 | Not Available | Positive | 6071832 - 6073757 | 68746.8 |
| nitt/taut family transport system substrate-binding protein/sulfonate transport system substrate-binding protein | SAMN05444680_11815 | Not Available | Negative | 6073777 - 6074757 | 34795.0 |
| nad-dependent dihydropyrimidine dehydrogenase, prea subunit | SAMN05444680_11816 | Not Available | Negative | 6074802 - 6075131 | 11697.9 |
| succinate dehydrogenase/fumarate reductase, flavoprotein subunit | SAMN05444680_11817 | Not Available | Negative | 6075128 - 6076747 | 57100.4 |
| abc-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein | SAMN05444680_11818 | Not Available | Positive | 6076949 - 6077992 | 37119.3 |
| nitt/taut family transport system atp-binding protein | SAMN05444680_11819 | Not Available | Positive | 6077989 - 6078846 | 31648.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
