Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium chelatase family protein | SAMN05444680_117121 | Not Available | Negative | 6036532 - 6037605 | 37314.9 |
| conserved hypothetical protein | SAMN05444680_117122 | Not Available | Positive | 6037766 - 6038626 | 31011.1 |
| nitrogen regulatory protein p-ii family | SAMN05444680_117123 | Not Available | Positive | 6038689 - 6039027 | 12273.0 |
| ammonium transporter | SAMN05444680_117124 | Not Available | Positive | 6039298 - 6040596 | 45281.0 |
| sugar lactone lactonase yvre | SAMN05444680_117125 | Not Available | Positive | 6040772 - 6041692 | 33697.0 |
| glycolate oxidase fad binding subunit | SAMN05444680_117126 | Not Available | Positive | 6041830 - 6042927 | 38836.4 |
| glycolate oxidase iron-sulfur subunit | SAMN05444680_117127 | Not Available | Positive | 6042934 - 6044166 | 44466.9 |
| hypothetical protein | SAMN05444680_117128 | Not Available | Positive | 6044253 - 6044675 | 14481.5 |
| glutathione peroxidase | SAMN05444680_117129 | Not Available | Negative | 6044692 - 6045177 | 17494.0 |
| eama-like transporter family protein | SAMN05444680_117130 | Not Available | Negative | 6045174 - 6046058 | 31122.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
