Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_117111 | Not Available | Positive | 6023743 - 6024954 | 43569.1 |
| amino acid/amide abc transporter membrane protein 1, haat family /amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444680_117112 | Not Available | Positive | 6024979 - 6026895 | 68026.9 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444680_117113 | Not Available | Positive | 6026892 - 6027695 | 28904.3 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444680_117114 | Not Available | Positive | 6027692 - 6028426 | 26996.9 |
| nicotinamidase/pyrazinamidase | SAMN05444680_117115 | Not Available | Positive | 6028455 - 6029186 | 25879.0 |
| nicotinate dehydrogenase subunit a | SAMN05444680_117116 | Not Available | Positive | 6029191 - 6029679 | 17060.4 |
| nicotinate dehydrogenase subunit b | SAMN05444680_117117 | Not Available | Positive | 6029676 - 6033401 | 131794.0 |
| fumarylacetoacetate (faa) hydrolase family protein | SAMN05444680_117118 | Not Available | Positive | 6033496 - 6034680 | 41534.6 |
| predicted arabinose efflux permease, mfs family | SAMN05444680_117119 | Not Available | Negative | 6034814 - 6036034 | 43359.1 |
| magnesium chelatase family protein | SAMN05444680_117120 | Not Available | Negative | 6036062 - 6036535 | 16868.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
