Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN05444680_117101 | Not Available | Positive | 6013767 - 6015545 | 65942.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444680_117102 | Not Available | Positive | 6015529 - 6016506 | 35682.4 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN05444680_117103 | Not Available | Positive | 6016503 - 6016901 | 14328.5 |
| enamidase | SAMN05444680_117104 | Not Available | Negative | 6016913 - 6018112 | 41698.4 |
| transcriptional regulator, tetr family | SAMN05444680_117105 | Not Available | Negative | 6018058 - 6018822 | 28211.5 |
| ferredoxin--nadp+ reductase | SAMN05444680_117106 | Not Available | Negative | 6018836 - 6019609 | 29224.3 |
| 6-hydroxynicotinate reductase | SAMN05444680_117107 | Not Available | Positive | 6019857 - 6021476 | 57939.5 |
| hypothetical protein | SAMN05444680_117108 | Not Available | Positive | 6021479 - 6022402 | 32304.5 |
| amino acid synthesis | SAMN05444680_117109 | Not Available | Positive | 6022424 - 6023065 | 23086.9 |
| amino acid synthesis | SAMN05444680_117110 | Not Available | Positive | 6023109 - 6023693 | 20250.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
