Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein, multidrug efflux system | SAMN05444680_101521 | Not Available | Negative | 541686 - 543158 | 52415.7 |
| multidrug efflux pump | SAMN05444680_101522 | Not Available | Negative | 543200 - 546460 | 116665.0 |
| membrane fusion protein, multidrug efflux system | SAMN05444680_101523 | Not Available | Negative | 546485 - 547741 | 44200.6 |
| acetyl esterase/lipase | SAMN05444680_101524 | Not Available | Negative | 547987 - 548847 | 29899.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_101525 | Not Available | Positive | 549028 - 549981 | 35230.3 |
| histidinol-phosphate aminotransferase | SAMN05444680_101526 | Not Available | Negative | 549962 - 550924 | 34638.1 |
| adenosylcobinamide-phosphate synthase | SAMN05444680_101527 | Not Available | Negative | 550921 - 551859 | 33451.8 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SAMN05444680_101528 | Not Available | Negative | 551872 - 552441 | 21032.5 |
| iron complex transport system atp-binding protein | SAMN05444680_101529 | Not Available | Negative | 552456 - 553226 | 27985.8 |
| iron complex transport system permease protein | SAMN05444680_101530 | Not Available | Negative | 553223 - 554230 | 33883.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
