Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazolonepropionase | SAMN05444680_11791 | Not Available | Positive | 6001245 - 6002495 | 44079.8 |
| formimidoylglutamate deiminase | SAMN05444680_11792 | Not Available | Positive | 6002488 - 6003885 | 49705.9 |
| n-formylglutamate deformylase | SAMN05444680_11793 | Not Available | Positive | 6003890 - 6004708 | 29986.6 |
| fad/fmn-containing dehydrogenase | SAMN05444680_11794 | Not Available | Positive | 6004714 - 6006093 | 48623.6 |
| histidinol-phosphate aminotransferase | SAMN05444680_11795 | Not Available | Positive | 6006090 - 6007217 | 40222.5 |
| methionine synthase (b12-dependent) | SAMN05444680_11796 | Not Available | Positive | 6007283 - 6008329 | 37713.9 |
| uncharacterized conserved protein yrai | SAMN05444680_11797 | Not Available | Positive | 6008501 - 6009316 | 28693.7 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_11798 | Not Available | Negative | 6009326 - 6010213 | 31762.2 |
| uncharacterized membrane protein | SAMN05444680_11799 | Not Available | Positive | 6010313 - 6010750 | 15838.6 |
| methionine synthase (b12-dependent) | SAMN05444680_117100 | Not Available | Positive | 6010904 - 6013621 | 100247.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
