Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted phosphoesterase | SAMN05444680_11771 | Not Available | Negative | 5977963 - 5978787 | 30360.3 |
| hypothetical protein | SAMN05444680_11772 | Not Available | Positive | 5978812 - 5979078 | 9666.79 |
| transcriptional regulator, lysr family | SAMN05444680_11773 | Not Available | Negative | 5979075 - 5980055 | 36033.6 |
| hypothetical protein | SAMN05444680_11774 | Not Available | Positive | 5980165 - 5980587 | 14876.1 |
| phosphoenolpyruvate carboxykinase (gtp) | SAMN05444680_11775 | Not Available | Negative | 5980681 - 5982528 | 67316.3 |
| hypothetical protein | SAMN05444680_11776 | Not Available | Negative | 5982733 - 5982885 | 5157.55 |
| threonine dehydratase | SAMN05444680_11777 | Not Available | Negative | 5982966 - 5984165 | 42404.3 |
| aaa+-type atpase, spovk/ycf46/vps4 family | SAMN05444680_11778 | Not Available | Positive | 5984287 - 5986608 | 86219.9 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN05444680_11779 | Not Available | Positive | 5986683 - 5988224 | 52603.8 |
| atp-dependent dna helicase recq | SAMN05444680_11780 | Not Available | Negative | 5988221 - 5990098 | 68765.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
