Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catechol 1,2-dioxygenase | SAMN05444680_11761 | Not Available | Negative | 5967264 - 5968130 | 31476.3 |
| transcriptional regulator, laci family | SAMN05444680_11762 | Not Available | Positive | 5968266 - 5969285 | 36740.5 |
| l-glutaminase | SAMN05444680_11763 | Not Available | Negative | 5969295 - 5970209 | 32449.1 |
| threonine/homoserine efflux transporter rhta | SAMN05444680_11764 | Not Available | Negative | 5970214 - 5971104 | 32282.3 |
| bon domain-containing protein | SAMN05444680_11765 | Not Available | Negative | 5971148 - 5971654 | 18613.3 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05444680_11766 | Not Available | Negative | 5971651 - 5972094 | 15651.4 |
| spore maturation protein spma | SAMN05444680_11767 | Not Available | Negative | 5972221 - 5973450 | 43129.9 |
| alkaline phosphatase d | SAMN05444680_11768 | Not Available | Positive | 5973489 - 5975030 | 57012.7 |
| nitric oxide dioxygenase | SAMN05444680_11769 | Not Available | Negative | 5975040 - 5976227 | 43320.8 |
| anaerobic nitric oxide reductase transcription regulator | SAMN05444680_11770 | Not Available | Positive | 5976384 - 5977955 | 57000.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
