Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha,alpha-trehalase | SAMN05444680_11751 | Not Available | Positive | 5959250 - 5960920 | 61517.0 |
| protein of unknown function | SAMN05444680_11752 | Not Available | Negative | 5960838 - 5961071 | 8519.36 |
| transcriptional regulator, lysr family | SAMN05444680_11753 | Not Available | Positive | 5961160 - 5962050 | 32465.8 |
| hypothetical protein | SAMN05444680_11754 | Not Available | Negative | 5962060 - 5962653 | 21064.7 |
| uncharacterized membrane protein | SAMN05444680_11755 | Not Available | Negative | 5962676 - 5963140 | 16546.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11756 | Not Available | Negative | 5963172 - 5964152 | 34338.6 |
| hypothetical protein | SAMN05444680_11757 | Not Available | Negative | 5964218 - 5964574 | 13097.8 |
| nadph:quinone reductase | SAMN05444680_11758 | Not Available | Negative | 5964596 - 5965597 | 35157.2 |
| uncharacterized conserved protein, duf849 family | SAMN05444680_11759 | Not Available | Negative | 5965594 - 5966481 | 32037.9 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_11760 | Not Available | Negative | 5966478 - 5967242 | 25907.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
