Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_11741 | Not Available | Negative | 5947771 - 5948169 | 14597.2 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05444680_11742 | Not Available | Negative | 5948226 - 5949764 | 54852.6 |
| abc-2 type transport system permease protein | SAMN05444680_11743 | Not Available | Negative | 5949788 - 5950918 | 41170.9 |
| abc-2 type transport system permease protein | SAMN05444680_11744 | Not Available | Negative | 5950928 - 5952091 | 41913.6 |
| abc-2 type transport system atp-binding protein | SAMN05444680_11745 | Not Available | Negative | 5952088 - 5953878 | 64280.5 |
| hlyd family secretion protein | SAMN05444680_11746 | Not Available | Negative | 5953878 - 5954924 | 37549.9 |
| transcriptional regulator, tetr family | SAMN05444680_11747 | Not Available | Positive | 5955033 - 5955758 | 26054.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_11748 | Not Available | Negative | 5955652 - 5956614 | 35059.9 |
| glutaryl-coa dehydrogenase | SAMN05444680_11749 | Not Available | Positive | 5956804 - 5958006 | 43435.3 |
| formyl-coa transferase | SAMN05444680_11750 | Not Available | Positive | 5958006 - 5959253 | 44354.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
