Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444680_11711 | Not Available | Negative | 5919171 - 5920043 | 31370.7 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_11712 | Not Available | Negative | 5920184 - 5921350 | 40993.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_11713 | Not Available | Negative | 5921462 - 5922280 | 30836.7 |
| benzoate-coa ligase | SAMN05444680_11714 | Not Available | Negative | 5922280 - 5923827 | 56190.8 |
| 3,4-dehydroadipyl-coa semialdehyde dehydrogenase | SAMN05444680_11715 | Not Available | Negative | 5923863 - 5925422 | 53940.5 |
| protein of unknown function | SAMN05444680_11716 | Not Available | Negative | 5925419 - 5925883 | 16616.7 |
| transcriptional regulator, xre family with shikimate kinase activity | SAMN05444680_11717 | Not Available | Positive | 5926062 - 5926994 | 33781.2 |
| 2,3-dihydro-2,3-dihydroxybenzoyl-coa ring cleavage enzyme | SAMN05444680_11718 | Not Available | Positive | 5927137 - 5928807 | 60893.3 |
| benzoyl-coa oxygenase, component b | SAMN05444680_11719 | Not Available | Positive | 5928842 - 5930269 | 53986.8 |
| benzoyl-coa oxygenase, component a | SAMN05444680_11720 | Not Available | Positive | 5930405 - 5931685 | 46866.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
