Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine phosphatase | SAMN05444680_101511 | Not Available | Positive | 531075 - 531785 | 25448.0 |
| cystathionine gamma-synthase | SAMN05444680_101512 | Not Available | Positive | 531789 - 533045 | 44571.6 |
| ig-like domain-containing protein | SAMN05444680_101513 | Not Available | Positive | 533247 - 535448 | 77665.7 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN05444680_101514 | Not Available | Negative | 535470 - 536657 | 42158.1 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN05444680_101515 | Not Available | Positive | 536736 - 537374 | 23462.6 |
| alpha-ribazole phosphatase | SAMN05444680_101516 | Not Available | Negative | 537419 - 537967 | 20045.9 |
| cobalamin-5'-phosphate synthase | SAMN05444680_101517 | Not Available | Negative | 537964 - 538761 | 27438.2 |
| nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase | SAMN05444680_101518 | Not Available | Negative | 538758 - 539801 | 35886.9 |
| adenosylcobyric acid synthase (glutamine-hydrolysing) | SAMN05444680_101519 | Not Available | Negative | 539798 - 541267 | 52296.6 |
| hypothetical protein | SAMN05444680_101520 | Not Available | Positive | 541392 - 541619 | 8230.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
