Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tir domain-containing protein | SAMN05444680_116135 | Not Available | Negative | 5896322 - 5898172 | 67168.6 |
| mth538 tir-like domain | SAMN05444680_116136 | Not Available | Positive | 5899013 - 5899435 | 16224.5 |
| transposase | SAMN05444680_116137 | Not Available | Negative | 5899734 - 5900096 | 13389.1 |
| hypothetical protein | SAMN05444680_116138 | Not Available | Positive | 5900828 - 5901580 | 27815.2 |
| hypothetical protein | SAMN05444680_116139 | Not Available | Negative | 5901588 - 5903579 | 69253.8 |
| hypothetical protein | SAMN05444680_116140 | Not Available | Negative | 5903600 - 5904922 | 48895.9 |
| is66 c-terminal element | SAMN05444680_116141 | Not Available | Positive | 5906240 - 5907295 | 39001.8 |
| hypothetical protein | SAMN05444680_116142 | Not Available | Positive | 5907360 - 5907851 | 18036.6 |
| hypothetical protein | SAMN05444680_116143 | Not Available | Negative | 5908150 - 5909280 | 41624.2 |
| transposase, is5 family | SAMN05444680_116144 | Not Available | Negative | 5910544 - 5910638 | 3097.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
