Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetone carboxylase, gamma subunit | SAMN05444680_11695 | Not Available | Negative | 5848679 - 5849185 | 19669.3 |
| acetone carboxylase, alpha subunit | SAMN05444680_11696 | Not Available | Negative | 5849209 - 5851533 | 87084.0 |
| acetone carboxylase, beta subunit | SAMN05444680_11697 | Not Available | Negative | 5851545 - 5853689 | 77812.7 |
| hypothetical protein | SAMN05444680_11698 | Not Available | Positive | 5854018 - 5854227 | 7818.25 |
| hypothetical protein | SAMN05444680_11699 | Not Available | Positive | 5854240 - 5854371 | 4584.39 |
| pare toxin of type ii toxin-antitoxin system, parde | SAMN05444680_116100 | Not Available | Negative | 5854465 - 5854776 | 11797.1 |
| phage integrase family protein | SAMN05444680_116101 | Not Available | Negative | 5855211 - 5856536 | 47547.7 |
| replication region dna-binding n-term | SAMN05444680_116102 | Not Available | Positive | 5856705 - 5857775 | 39550.5 |
| aaa domain-containing protein | SAMN05444680_116103 | Not Available | Negative | 5858182 - 5859417 | 46019.6 |
| hypothetical protein | SAMN05444680_116104 | Not Available | Positive | 5859816 - 5860181 | 12977.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
