Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_11685 | Not Available | Negative | 5836310 - 5836504 | 7429.81 |
| hypothetical protein | SAMN05444680_11686 | Not Available | Negative | 5836517 - 5836675 | 6017.2 |
| nitt/taut family transport system substrate-binding protein | SAMN05444680_11687 | Not Available | Positive | 5837229 - 5838236 | 35407.9 |
| two-component system, ompr family, response regulator tctd | SAMN05444680_11688 | Not Available | Positive | 5838246 - 5838917 | 24823.1 |
| two-component system, ompr family, sensor histidine kinase tcte | SAMN05444680_11689 | Not Available | Positive | 5838914 - 5840329 | 51039.6 |
| succinyl-coa synthetase, beta subunit | SAMN05444680_11690 | Not Available | Positive | 5840461 - 5841750 | 47037.8 |
| succinyl-coa synthetase, alpha subunit | SAMN05444680_11691 | Not Available | Positive | 5841762 - 5844485 | 96027.7 |
| citrate carrier protein, ccs family | SAMN05444680_11692 | Not Available | Positive | 5844521 - 5845876 | 47869.0 |
| hypothetical protein | SAMN05444680_11693 | Not Available | Positive | 5845919 - 5846116 | 7659.58 |
| transcriptional regulator of acetoin/glycerol metabolism | SAMN05444680_11694 | Not Available | Negative | 5846627 - 5848585 | 70379.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
