Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) domain-containing protein | SAMN05444680_11675 | Not Available | Positive | 5824893 - 5825402 | 18071.9 |
| hypothetical protein | SAMN05444680_11676 | Not Available | Positive | 5825995 - 5826147 | 5414.43 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_11677 | Not Available | Positive | 5826158 - 5826955 | 28762.6 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | SAMN05444680_11678 | Not Available | Positive | 5826974 - 5829283 | 82008.3 |
| aerobic c4-dicarboxylate transport protein | SAMN05444680_11679 | Not Available | Positive | 5829303 - 5830646 | 47687.9 |
| nadh dehydrogenase | SAMN05444680_11680 | Not Available | Positive | 5830656 - 5832017 | 49253.5 |
| two-component system, ntrc family, c4-dicarboxylate transport sensor histidine kinase dctb | SAMN05444680_11681 | Not Available | Positive | 5832080 - 5833918 | 66019.3 |
| two-component system, ntrc family, c4-dicarboxylate transport response regulator dctd | SAMN05444680_11682 | Not Available | Positive | 5833926 - 5835293 | 50601.0 |
| tnib protein | SAMN05444680_11683 | Not Available | Positive | 5835662 - 5835925 | 9304.35 |
| predicted transcriptional regulator | SAMN05444680_11684 | Not Available | Negative | 5835963 - 5836313 | 12921.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
