Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN05444680_11665 | Not Available | Positive | 5816083 - 5816364 | 10474.8 |
| serine/threonine-protein kinase hipa | SAMN05444680_11666 | Not Available | Positive | 5816361 - 5817650 | 46725.6 |
| gdsl-like lipase/acylhydrolase family protein | SAMN05444680_11667 | Not Available | Positive | 5818121 - 5818876 | 26675.0 |
| acetyl-coa c-acetyltransferase | SAMN05444680_11668 | Not Available | Positive | 5819553 - 5819975 | 14502.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_11669 | Not Available | Negative | 5820037 - 5820936 | 32694.2 |
| d-threo-aldose 1-dehydrogenase | SAMN05444680_11670 | Not Available | Positive | 5821033 - 5822046 | 36564.8 |
| mfs transporter, dha1 family, inner membrane transport protein | SAMN05444680_11671 | Not Available | Positive | 5822080 - 5823336 | 42935.1 |
| hypothetical protein | SAMN05444680_11672 | Not Available | Negative | 5823793 - 5824230 | 15988.5 |
| hypothetical protein | SAMN05444680_11673 | Not Available | Negative | 5824227 - 5824460 | 8300.21 |
| uncharacterized conserved protein, duf1778 family | SAMN05444680_11674 | Not Available | Positive | 5824618 - 5824896 | 10144.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
