Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_11645 | Not Available | Negative | 5793250 - 5794428 | 41869.1 |
| hypothetical protein | SAMN05444680_11646 | Not Available | Negative | 5795116 - 5795469 | 12263.4 |
| hypothetical protein | SAMN05444680_11647 | Not Available | Negative | 5795445 - 5795684 | 8269.87 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_11648 | Not Available | Negative | 5795913 - 5797070 | 41936.6 |
| hypothetical protein | SAMN05444680_11649 | Not Available | Negative | 5797418 - 5798128 | 26360.1 |
| hypothetical protein | SAMN05444680_11650 | Not Available | Negative | 5798376 - 5798615 | 9115.02 |
| hypothetical protein | SAMN05444680_11651 | Not Available | Negative | 5798953 - 5800143 | 41381.7 |
| transcriptional regulator, lysr family | SAMN05444680_11652 | Not Available | Negative | 5800572 - 5801480 | 33031.3 |
| benzoylformate decarboxylase | SAMN05444680_11653 | Not Available | Positive | 5801601 - 5803220 | 57377.2 |
| vanillin dehydrogenase | SAMN05444680_11654 | Not Available | Positive | 5803276 - 5804724 | 49553.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
