Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 519492 - 519568 | Not Available |
| gtp pyrophosphokinase | SAMN05444680_101502 | Not Available | Negative | 519617 - 521899 | 83628.2 |
| 3-hydroxybutyrate dehydrogenase | SAMN05444680_101503 | Not Available | Positive | 522005 - 522775 | 26959.4 |
| predicted secreted protein | SAMN05444680_101504 | Not Available | Negative | 522794 - 523504 | 24976.7 |
| hypothetical protein | SAMN05444680_101505 | Not Available | Negative | 523551 - 523889 | 11898.3 |
| two-component system, ompr family, phosphate regulon response regulator ompr | SAMN05444680_101506 | Not Available | Positive | 524061 - 524792 | 27236.8 |
| two-component system, ompr family, osmolarity sensor histidine kinase envz | SAMN05444680_101507 | Not Available | Positive | 524805 - 526301 | 54948.1 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN05444680_101508 | Not Available | Negative | 526305 - 526790 | 16918.7 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase / 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN05444680_101509 | Not Available | Negative | 526787 - 527497 | 24859.9 |
| transcription-repair coupling factor | SAMN05444680_101510 | Not Available | Positive | 527506 - 531078 | 132106.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
