Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05444680_115163 | Not Available | Positive | 5740615 - 5741871 | 45403.2 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05444680_115164 | Not Available | Positive | 5741864 - 5743405 | 55172.3 |
| ribose transport system permease protein | SAMN05444680_115165 | Not Available | Positive | 5743437 - 5744507 | 36394.4 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN05444680_115166 | Not Available | Positive | 5744549 - 5745487 | 33020.8 |
| fructokinase | SAMN05444680_115167 | Not Available | Positive | 5745504 - 5746430 | 32579.9 |
| malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase | SAMN05444680_115168 | Not Available | Negative | 5746559 - 5747311 | 27245.9 |
| hypothetical protein | SAMN05444680_1161 | Not Available | Positive | 5747312 - 5747411 | 3411.92 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_1162 | Not Available | Positive | 5747489 - 5748481 | 35114.1 |
| arac-type dna-binding protein | SAMN05444680_1163 | Not Available | Negative | 5748519 - 5749514 | 36884.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_1164 | Not Available | Negative | 5749555 - 5750544 | 35439.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
