Variovorax sp. YR216

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. YR216 is a rod-shaped bacterium characterized by its single replicon structure. This trait is significant as it suggests a streamlined genetic organization, which may facilitate efficient replication and adaptability to its environment. The sequence data for this organism is available under the accession FNRO00000000.1, contributing to the understanding of its genetic makeup and potential functionalities. The rod shape of Variovorax sp. YR216 may influence its motility and ecological interactions. Rod-shaped bacteria often exhibit different behaviors in biofilm formation and nutrient acquisition compared to coccoid or filamentous forms. This morphology can affect the bacterium's ability to colonize various environments, potentially impacting its ecological role. Understanding the traits of Variovorax sp. YR216, particularly its morphology and genetic structure, provides insight into its adaptability and ecological niche. This organism may play a role in biogeochemical cycles or contribute to environmental processes due to its unique characteristics. Further research could elucidate its specific functions within microbial communities, highlighting the importance of such bacteria in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. YR216
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. YR216 genome assembly, contig: Ga0115522_149, whole

Gene Summary

Adenine Count

1243614 bp

Thymine Count

1246362 bp

Guanine Count

2445666 bp

Cytosine Count

2435852 bp

Genome Length

7371494 bp

Protein-coding Genes

6957 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucose-6-phosphate isomeraseSAMN05444680_115153Not AvailableNegative5727637 - 572923257854.0
glucose-6-phosphate 1-dehydrogenaseSAMN05444680_115154Not AvailableNegative5729261 - 573072453948.8
nadh dehydrogenaseSAMN05444680_115155Not AvailableNegative5730776 - 573214049477.8
phosphoglycerate mutaseSAMN05444680_115156Not AvailableNegative5732145 - 573289427931.1
2-keto-3-deoxy-phosphogluconate aldolaseSAMN05444680_115157Not AvailableNegative5732922 - 573355421292.1
6-phosphogluconate dehydrataseSAMN05444680_115158Not AvailableNegative5733551 - 573545566672.9
pyruvate kinaseSAMN05444680_115159Not AvailableNegative5735492 - 573690750432.8
acyl-coa reductaseSAMN05444680_115160Not AvailableNegative5736919 - 573855659733.4
sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domainSAMN05444680_115161Not AvailableNegative5738579 - 573979643154.6
l-fucose mutarotaseSAMN05444680_115162Not AvailableNegative5739793 - 574024816353.9

Displaying genes 5531 – 5540 of 7041 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.