Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s2p | SAMN05444680_101491 | Not Available | Negative | 508502 - 509257 | 27575.3 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05444680_101492 | Not Available | Positive | 509465 - 510793 | 46274.3 |
| d-amino-acid dehydrogenase | SAMN05444680_101493 | Not Available | Positive | 510845 - 512101 | 45340.8 |
| yjef c-terminal region, hydroxyethylthiazole kinase-related/yjef n-terminal region | SAMN05444680_101494 | Not Available | Positive | 512120 - 513589 | 49818.1 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05444680_101495 | Not Available | Negative | 513594 - 514355 | 26667.0 |
| rnase r | SAMN05444680_101496 | Not Available | Negative | 514371 - 516554 | 80955.6 |
| Trna-leu | Not Available | Not Available | Positive | 516690 - 516771 | Not Available |
| ssu ribosomal protein s12p methylthiotransferase | SAMN05444680_101498 | Not Available | Negative | 516853 - 518259 | 50887.4 |
| polyhydroxyalkanoate synthesis repressor phar | SAMN05444680_101499 | Not Available | Negative | 518299 - 518832 | 20125.6 |
| hypothetical protein | SAMN05444680_101500 | Not Available | Negative | 518931 - 519299 | 13506.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
