Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| feruloyl esterase | SAMN05444680_115103 | Not Available | Positive | 5679768 - 5681528 | 60644.3 |
| arac-type dna-binding protein | SAMN05444680_115104 | Not Available | Positive | 5681655 - 5682815 | 42007.5 |
| hypothetical protein | SAMN05444680_115105 | Not Available | Negative | 5682801 - 5683826 | 36115.5 |
| short chain enoyl-coa hydratase | SAMN05444680_115106 | Not Available | Negative | 5683996 - 5684802 | 28603.3 |
| branched-chain amino acid transport system substrate-binding protein | SAMN05444680_115107 | Not Available | Negative | 5684808 - 5685113 | 10069.0 |
| hypothetical protein | SAMN05444680_115108 | Not Available | Negative | 5685151 - 5685645 | 18043.7 |
| predicted kinase, aminoglycoside phosphotransferase (apt) family | SAMN05444680_115109 | Not Available | Negative | 5685642 - 5686676 | 38491.1 |
| probable phosphoglycerate mutase | SAMN05444680_115110 | Not Available | Negative | 5686682 - 5687305 | 22317.7 |
| citronellol/citronellal dehydrogenase | SAMN05444680_115111 | Not Available | Negative | 5687310 - 5688179 | 30665.3 |
| cyclohexanecarboxyl-coa dehydrogenase | SAMN05444680_115112 | Not Available | Negative | 5688198 - 5689343 | 41403.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
