Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_11593 | Not Available | Negative | 5668669 - 5669583 | 32312.0 |
| uncharacterized conserved protein, duf849 family | SAMN05444680_11594 | Not Available | Negative | 5669600 - 5670541 | 34278.5 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444680_11595 | Not Available | Negative | 5670559 - 5671281 | 25891.6 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444680_11596 | Not Available | Negative | 5671278 - 5672033 | 27786.5 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444680_11597 | Not Available | Negative | 5672030 - 5673313 | 44172.9 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444680_11598 | Not Available | Negative | 5673313 - 5674254 | 32990.8 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_11599 | Not Available | Negative | 5674258 - 5675049 | 27652.4 |
| sugar diacid utilization regulator | SAMN05444680_115100 | Not Available | Positive | 5675272 - 5677230 | 70260.6 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05444680_115101 | Not Available | Negative | 5677256 - 5678032 | 27253.9 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_115102 | Not Available | Negative | 5678141 - 5679391 | 43915.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
