Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05444680_11583 | Not Available | Negative | 5658815 - 5660071 | 42432.7 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_11584 | Not Available | Positive | 5660145 - 5661128 | 36666.3 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | SAMN05444680_11585 | Not Available | Negative | 5661278 - 5662069 | 28009.7 |
| hypothetical protein | SAMN05444680_11586 | Not Available | Positive | 5662187 - 5663302 | 42471.0 |
| voltage-gated potassium channel | SAMN05444680_11587 | Not Available | Positive | 5663553 - 5664413 | 32056.5 |
| surface antigen | SAMN05444680_11588 | Not Available | Positive | 5664425 - 5665594 | 41551.4 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05444680_11589 | Not Available | Positive | 5665707 - 5666480 | 27578.8 |
| hypothetical protein | SAMN05444680_11590 | Not Available | Negative | 5666565 - 5667227 | 23740.9 |
| hypothetical protein | SAMN05444680_11591 | Not Available | Positive | 5667826 - 5668068 | 8765.31 |
| protein-s-isoprenylcysteine o-methyltransferase ste14 | SAMN05444680_11592 | Not Available | Negative | 5668014 - 5668508 | 18155.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
