Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_11563 | Not Available | Negative | 5638127 - 5639338 | 43360.8 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444680_11564 | Not Available | Positive | 5639503 - 5640732 | 43556.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11565 | Not Available | Positive | 5640789 - 5641778 | 34438.5 |
| multidrug transporter emre | SAMN05444680_11566 | Not Available | Negative | 5641812 - 5642237 | 14879.7 |
| putative abc transport system permease protein | SAMN05444680_11567 | Not Available | Negative | 5642403 - 5643221 | 29277.8 |
| abc-type iron transport system fetab, atpase component | SAMN05444680_11568 | Not Available | Negative | 5643218 - 5643832 | 21924.4 |
| mfs transporter, mhs family, alpha-ketoglutarate permease | SAMN05444680_11569 | Not Available | Negative | 5643939 - 5645288 | 48457.1 |
| two component transcriptional regulator, luxr family | SAMN05444680_11570 | Not Available | Negative | 5645437 - 5646051 | 22375.0 |
| pas domain s-box-containing protein | SAMN05444680_11571 | Not Available | Negative | 5646048 - 5648243 | 81138.9 |
| hypothetical protein | SAMN05444680_11572 | Not Available | Negative | 5648425 - 5648910 | 17767.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
