Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN05444680_11543 | Not Available | Positive | 5619345 - 5621000 | 61870.2 |
| hypothetical protein | SAMN05444680_11544 | Not Available | Negative | 5621007 - 5621618 | 23508.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444680_11545 | Not Available | Positive | 5621709 - 5623001 | 46897.7 |
| major facilitator superfamily protein | SAMN05444680_11546 | Not Available | Negative | 5623023 - 5624294 | 44239.6 |
| dna-binding transcriptional regulator, gntr family | SAMN05444680_11547 | Not Available | Negative | 5624380 - 5625009 | 23363.7 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN05444680_11548 | Not Available | Negative | 5625040 - 5625852 | 28376.2 |
| nicotinamidase-related amidase | SAMN05444680_11549 | Not Available | Negative | 5625867 - 5626448 | 21468.6 |
| benzylsuccinate coa-transferase bbsf subunit/formyl-coa transferase | SAMN05444680_11550 | Not Available | Negative | 5626484 - 5627683 | 43169.3 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444680_11551 | Not Available | Negative | 5627680 - 5628849 | 42099.0 |
| acyl dehydratase | SAMN05444680_11552 | Not Available | Negative | 5628885 - 5630102 | 44924.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
